15 Delicious Butternut Squash Breakfast Bakes

Butternut squash isn’t just for soups and savory dinners—it’s a versatile, naturally sweet ingredient that brings warmth, depth, and nutrition to your mornings.

Rich in vitamins A and C, fiber, and antioxidants, it pairs beautifully with both sweet and savory flavors, making it a star in breakfast recipes.

Its natural sweetness balances spices like cinnamon and nutmeg, while its creamy texture enhances baked goods and casseroles alike.

These butternut squash breakfast bakes are perfect for chilly mornings, weekend brunches, or when you want something nourishing yet indulgent.

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1. Butternut Squash Breakfast Casserole

A savory, filling breakfast bake layered with roasted butternut squash, eggs, cheese, and spinach. Perfect for a family brunch or meal prep, it’s hearty and satisfying.

Ingredients:

• 2 cups roasted butternut squash cubes
• 6 eggs
• 1 cup shredded cheddar cheese
• 2 cups fresh spinach
• ½ cup milk
• Salt and pepper to taste

Instructions:

1. Preheat oven to 375°F (190°C).
2. Layer roasted squash and spinach in a greased baking dish.
3. Whisk eggs, milk, salt, and pepper, then pour over veggies.
4. Sprinkle cheese on top.
5. Bake for 35–40 minutes until set and golden.

Twist: Add cooked turkey sausage or bacon for extra protein and flavor.

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2. Butternut Squash Oatmeal Bake

This cozy, lightly sweetened bake combines oats, roasted squash, cinnamon, and maple syrup for a nourishing breakfast that doubles as a healthy dessert.

Ingredients:

• 2 cups rolled oats
• 1 cup mashed roasted butternut squash
• 2 cups milk (dairy or non-dairy)
• ¼ cup maple syrup
• 1 tsp cinnamon
• 1 tsp vanilla extract
• ½ cup chopped pecans

Instructions:

1. Preheat oven to 350°F (175°C).
2. Mix oats, cinnamon, and pecans in a bowl.
3. In another bowl, combine squash, milk, maple syrup, and vanilla.
4. Stir wet and dry ingredients together, then spread into a greased dish.
5. Bake for 30–35 minutes until golden.

Twist: Top with a dollop of Greek yogurt for a creamy finish.

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3. Butternut Squash & Apple Crumble Bake

A sweet and spiced dish with roasted squash, apples, and a crunchy oat crumble topping—perfect for cozy fall mornings.

Ingredients:

• 2 cups diced butternut squash
• 2 apples, sliced
• 2 tbsp maple syrup
• 1 tsp cinnamon
• ½ cup oats
• ¼ cup flour
• 3 tbsp butter (or coconut oil)

Instructions:

1. Preheat oven to 375°F (190°C).
2. Toss squash and apples with maple syrup and cinnamon, then place in a baking dish.
3. Mix oats, flour, and butter to form a crumble.
4. Sprinkle crumble over fruit.
5. Bake for 30–35 minutes until golden and bubbly.

Twist: Add dried cranberries for a festive flavor.

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4. Butternut Squash & Feta Egg Bake

A savory bake featuring the creaminess of roasted butternut squash paired with tangy feta and fluffy eggs for a Mediterranean-inspired dish.

Ingredients:

• 2 cups roasted butternut squash cubes
• 5 eggs
• ½ cup crumbled feta cheese
• ½ cup milk
• 1 tsp oregano
• Salt and pepper to taste

Instructions:

1. Preheat oven to 375°F (190°C).
2. Layer roasted squash in a greased baking dish.
3. Whisk eggs, milk, oregano, salt, and pepper. Pour over squash.
4. Sprinkle with feta.
5. Bake for 30–35 minutes until set.

Twist: Add fresh herbs like basil or thyme for extra aroma.

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5. Butternut Squash Coffee Cake Bake

A subtly sweet coffee cake made moist with mashed butternut squash and topped with a buttery cinnamon crumble—perfect with your morning coffee.

Ingredients:

• 2 cups flour
• 1 cup mashed roasted butternut squash
• ½ cup sugar
• 2 eggs
• ½ cup milk
• 1 tsp cinnamon
• 1 tsp baking powder
• ½ cup crumble topping (butter, flour, sugar)

Instructions:

1. Preheat oven to 350°F (175°C).
2. Mix flour, baking powder, cinnamon, and sugar.
3. Add eggs, milk, and squash, mixing until smooth.
4. Spread into a greased pan.
5. Top with crumble mixture and bake for 35–40 minutes.

Twist: Add a drizzle of cream cheese glaze for extra indulgence.

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6. Butternut Squash & Quinoa Breakfast Bake

A protein-packed, gluten-free breakfast that blends fluffy quinoa with roasted butternut squash, eggs, and herbs. It’s light yet filling, making it ideal for busy mornings or meal prep.

Ingredients:

• 2 cups cooked quinoa
• 1½ cups roasted butternut squash
• 4 eggs
• 1 cup milk
• 1 tsp thyme
• Salt and pepper to taste

Instructions:

1. Preheat oven to 375°F (190°C).
2. Mix quinoa and squash in a greased baking dish.
3. Whisk eggs, milk, thyme, salt, and pepper.
4. Pour mixture over quinoa and squash.
5. Bake for 30–35 minutes until set.

Twist: Sprinkle with goat cheese before baking for a tangy kick.

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7. Butternut Squash & Cinnamon Roll Bake

This sweet breakfast treat combines cinnamon rolls with a creamy butternut squash custard base, creating a fall-inspired dish that’s perfect for holiday mornings.

Ingredients:

• 1 can refrigerated cinnamon rolls (cut into pieces)
• 1 cup mashed roasted butternut squash
• 3 eggs
• 1 cup milk
• 1 tsp cinnamon
• ½ tsp nutmeg

Instructions:

1. Preheat oven to 350°F (175°C).
2. Spread cinnamon roll pieces in a greased dish.
3. Mix squash, eggs, milk, cinnamon, and nutmeg.
4. Pour mixture over rolls.
5. Bake for 35–40 minutes until golden.

Twist: Drizzle with the included cinnamon roll icing just before serving.

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8. Butternut Squash & Sausage Breakfast Bake

A hearty, savory dish with roasted squash, sausage, eggs, and cheese. It’s a full breakfast in one pan that’s both satisfying and meal-prep friendly.

Ingredients:

• 2 cups roasted butternut squash
• 1 lb breakfast sausage (cooked)
• 6 eggs
• 1 cup shredded cheddar
• ½ cup milk
• Salt and pepper

Instructions:

1. Preheat oven to 375°F (190°C).
2. Layer squash and sausage in a greased baking dish.
3. Whisk eggs, milk, salt, and pepper. Pour over mixture.
4. Sprinkle with cheddar.
5. Bake 35–40 minutes until bubbly and set.

Twist: Swap sausage for chorizo for a spicy variation.

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9. Butternut Squash & Cranberry Bread Bake

Sweet and tart, this bread bake blends butternut squash puree with cranberries and warm spices. Moist, flavorful, and festive, it’s a perfect seasonal bake.

Ingredients:

• 2 cups flour
• 1 cup mashed roasted butternut squash
• ½ cup sugar
• 2 eggs
• ½ cup dried cranberries
• 1 tsp cinnamon
• 1 tsp baking powder

Instructions:

1. Preheat oven to 350°F (175°C).
2. Mix flour, sugar, cinnamon, and baking powder.
3. Add eggs and squash, mixing until smooth.
4. Fold in cranberries.
5. Bake in a greased loaf pan for 40–45 minutes.

Twist: Add orange zest for a fresh, citrusy flavor.

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10. Butternut Squash & Ricotta Breakfast Bake

This creamy, savory dish layers roasted squash with fluffy ricotta and eggs for a custard-like bake that feels gourmet yet simple.

Ingredients:

• 2 cups roasted butternut squash
• 1 cup ricotta cheese
• 4 eggs
• ½ cup milk
• 1 tsp sage
• Salt and pepper

Instructions:

1. Preheat oven to 375°F (190°C).
2. Layer squash in a greased dish.
3. Whisk ricotta, eggs, milk, sage, salt, and pepper.
4. Pour mixture over squash.
5. Bake 30–35 minutes until golden and puffed.

Twist: Add a drizzle of honey for a sweet-savory contrast.

11. Butternut Squash & Maple Pecan Bake

A sweet, cozy breakfast bake with roasted butternut squash, maple syrup, and crunchy pecans. It’s warm, nutty, and perfect for serving with coffee or tea on crisp mornings.

Ingredients:

• 2 cups diced butternut squash
• 3 tbsp maple syrup
• ½ cup chopped pecans
• 1 tsp cinnamon
• 2 eggs
• ½ cup milk

Instructions:

1. Preheat oven to 350°F (175°C).
2. Toss squash with maple syrup and cinnamon, place in a dish.
3. Whisk eggs and milk, then pour over squash.
4. Sprinkle pecans on top.
5. Bake for 35 minutes until golden.

Twist: Add a sprinkle of nutmeg for extra warmth.

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12. Butternut Squash & Kale Egg Bake

A wholesome, nutrient-packed breakfast that balances the sweetness of roasted squash with earthy kale and fluffy eggs. Great for meal prep and packed with vitamins.

Ingredients:

• 2 cups roasted butternut squash
• 2 cups chopped kale
• 6 eggs
• ½ cup milk
• 1 cup mozzarella cheese
• Salt and pepper

Instructions:

1. Preheat oven to 375°F (190°C).
2. Spread squash and kale in a greased dish.
3. Whisk eggs, milk, salt, and pepper. Pour over veggies.
4. Sprinkle with mozzarella.
5. Bake 35–40 minutes until set.

Twist: Add red pepper flakes for a little heat.

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13. Butternut Squash & Almond Flour Breakfast Bake

A grain-free, naturally sweetened bake made with almond flour, squash puree, and spices. It’s fluffy, moist, and perfect for gluten-free eaters.

Ingredients:

• 2 cups almond flour
• 1 cup mashed roasted butternut squash
• 3 eggs
• ¼ cup honey or maple syrup
• 1 tsp cinnamon
• 1 tsp baking powder

Instructions:

1. Preheat oven to 350°F (175°C).
2. Mix almond flour, baking powder, and cinnamon.
3. Stir in squash, eggs, and honey until smooth.
4. Pour into a greased dish.
5. Bake 30–35 minutes until golden.

Twist: Top with sliced almonds for extra crunch.

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14. Butternut Squash & Mushroom Breakfast Bake

A savory, earthy dish that pairs caramelized mushrooms with sweet roasted squash, eggs, and herbs. Comforting yet wholesome, it’s perfect for brunch gatherings.

Ingredients:

• 2 cups roasted butternut squash
• 1½ cups sautéed mushrooms
• 5 eggs
• ½ cup milk
• 1 cup shredded Gruyère cheese
• 1 tsp thyme

Instructions:

1. Preheat oven to 375°F (190°C).
2. Spread squash and mushrooms in a greased dish.
3. Whisk eggs, milk, thyme, salt, and pepper. Pour over veggies.
4. Top with Gruyère cheese.
5. Bake 35 minutes until bubbly and set.

Twist: Add caramelized onions for extra flavor depth.

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15. Butternut Squash & Chocolate Chip Bread Bake

A delightful sweet bake that combines creamy butternut squash puree with melty chocolate chips. Moist, tender, and indulgent—perfect for kids and adults alike.

Ingredients:

• 2 cups flour
• 1 cup mashed roasted butternut squash
• ½ cup sugar
• 2 eggs
• ½ cup chocolate chips
• 1 tsp cinnamon
• 1 tsp baking powder

Instructions:

1. Preheat oven to 350°F (175°C).
2. Mix flour, sugar, cinnamon, and baking powder.
3. Stir in squash and eggs until smooth.
4. Fold in chocolate chips.
5. Bake 40 minutes until a toothpick comes out clean.

Twist: Sprinkle extra chocolate chips on top before baking for a gooey finish.